Laboratory of Neuro-Repair

The Laboratory of Neuro-Repair works on the natural mechanisms that trigger brain repair. We are currently focused on the role of the growth factor/neuropeptide VGF (non-acronymic) and the regulation of gene expression through environmental enrichment such as exercise. Our studies employ a diverse array of biological and biochemical techniques including mouse transgenesis, primary tissue culture, virology, proteomics, high resolution microscopy and high-throughput sequencing. We also investigate the role of nuclear matrix proteins and their role in paraspeckle function. More specifically, we investigate the post-transcriptional role of A-to-I RNA editing (Adenosine-to-Inosine) in the regulation of gene expression and pathologies of the brain.

Laboratorio de Neuro-Reparación

El Laboratorio de Neuro-Reparación investiga los mecanismos de reparación del cerebro a través del factor de crecimiento/neuropéptido VGF (no acrónimo) y la regulación de la expresión génica a través del ejercicio. Nuestro laboratorio emplea una diversidad de técnicas de la biología molecular, transgénesis en modelos murinos, cultivo celular, virología, proteómica, secuenciación de alto rendimiento y microscopía de alta resolución. En una línea de investigación paralela, estudiamos el rol de las proteínas que forman la matriz nuclear y la función molecular de los cuerpos subnucleares llamados "paraspeckles". Específicamente, nos interesa entender la función del  “A-to-I RNA-editing” (Adenosina a Inosina edición del RNA) en la regulación de la expresión génica y la plasticidad neuronal.

A-to-I RNA editing, paraspeckles & neuronal regulation of gene expression

A major focus of the laboratory is to understand the functional role of Adenosine-to-Inosine RNA Editing in the mammalian central nervous system. Adenosine to Inosine (A-to-I) editing of RNA molecules is the main form of RNA editing in mammals. Adenosine deaminases acting on RNA (ADAR) enzymes are the catalytic components that carry out the hydrolytic demamination of Adenosine to Inosine. This chemical change is then recognized as Guanosine by the translation machinery. Thus, A-to-I editing has the potential to diversify the proteome, create new splice sites and many other molecular alternatives that are yet to be discovered. It is now recognized that alterations in A-to-I RNA editing components underlie a wide array of neurodegenerative pathologies and brain cancers, amongst other diseases.

Our laboratory investigates the role of nuclear matrix proteins as key structural components that regulate the integrity and function of subnuclear bodies such as paraspeckles. We are interested in understanding how A-to-I RNA editing mediates the nuclear retention of mRNA and miRNA species; and how A-to-I RNA editing governs the processing and transport of RNA molecules through subcellular compartments (e.g. intradendritic transport).

Molecular mechanisms that mediate OPC proliferation in CNS pathologies

The capacity of the brain to regenerate has been debated for decades amongst neurobiologists. In fact, the history of adult mammalian neurogenesis is quite controversial. Primary evidence arose from the work in rats of Josef Altman and Gopal Das in the 1960s. However, their pioneering work was not sufficient to change the existing paradigm that neurons did not have the capacity to regenerate in the adult brain. In the 70s, Fernando Nottebohm in birds and Michael Kaplan in rodents showed the existence of neurogenesis in the adult brain. In the 80s, neurogenesis in birds was widely accepted, but it was much harder for scientists to accept the view that adult neurogenesis also occurred in mammals. This notion was strongly refused by a major leader in developmental neurobiology, Dr. Pasko Rukic. His articles in the 70s and 80s strongly opposed adult neurogenesis in primates, suggesting that adult neurogenesis did not occur in higher mammals and was confined to lower mammalian species.

Work in the 90s by Elizabeth Gould, Peter Erikkson and Fred “Rusty’ Gage sparked a new era in the existence of adult mammalian neurogenesis. Nevertheless, a new paradigm has recently emerged: that the major cell types undergoing cell proliferation in the adult brain are not neurons, but myelin-producing cells: oligodendrocyte precursor cells (OPCs). These cells undergo adult oligodendrogenesis and are found in white and gray matter. The Neuro-Repair Laboratory is interested in understanding the basic biological principles that dictate how OPCs respond to the environment and how these cells interact with other cell types of the central nervous system to modulate natural brain repair mechanisms. Simply, we aim to understand the mechanisms of OPC proliferation, induction of oligodendrogenesis by neuronal activity, and de novo myelination of damaged neuronal circuits through a combinatorial approach utilizing the latest technologies available.


Matías Alvarez Saavedra, B.Sc., M.Sc., Ph.D.

Principal Investigator & Assistant Professor, Department of Cellular & Molecular Biology, Faculty of Biological Sciences



We demonstrate that voluntary running activity can significantly extend the lifespan and ameliorate the ataxia-like phenotypes and short lifespan of the Snf2h cKO mouse model. We further decipher for the first time that the neuropeptide VGF (non-acronymic; not to be confused with VEGF; OMIM #602186) is strongly expressed in OPCs and plays a  role within a mechanism of brain repair mediated by OPC expansion and subsequent myelination of damaged cerebellar circuits. We believe this work establishes a paradigm for exercise-induced brain repair in a neurodegenerative state and furthermore identifies a possible drug target (i.e. VGF) to stimulate endogenous remyelination. VGF encodes a secretory peptide precursor involved in synaptic plasticity and metabolism. VGF has been shown to be modulated by in vivo neuronal activity paradigms, such as exercise in the hippocampus, leading to the induction of other neurotrophic factors and synaptic remodeling. Additionally, VGF peaks in expression during axonal outgrowth and synaptogenesis in the maturing brain. Mouse VGF knockouts are small and hypermetabolic, suggesting a prominent role in energy metabolism. These results show that VGF plays diverse roles as a neurotrophic factor, neuroendocrine modulator, and mediator of a myelin-based brain repair mechanism.


We demonstrate how the chromatin remodeler protein Snf2h, also known as Smarca5 (OMIM #603375), regulates neuronal progenitor expansion in the embryonic and postnatal brain. We further show that Snf2h governs the morphogenesis of the adult mouse cerebellum, a major structure responsible for sensorimotor control and higher order cognitive processes. We highlight how Snf2h is mechanistically involved in histone H1 dynamics and chromatin plasticity.


We demonstrate how the chromatin remodeler protein Snf2l, also known as Smarca1 (OMIM #300012), regulates neuronal differentiation, and thus brain size. With novel approaches in high-throughput exome sequencing, it is now recognized that mutations in Snf2l may also underlie some forms of Rett Syndrome-like phenotypes (OMIM #312750),


Press Releases

Voluntary Running Triggers VGF-Mediated Oligodendrogenesis to Prolong the Lifespan of Snf2h-Null Ataxic Mice 0896/news

Key brain repair molecule identified

Key brain repair molecule identified

Exercise is good for the brain

Exercise is good for the brain

See all our news